Chapter 2-microbiomeDataset class

About

microbiomedataset provide the microbiome_dataset class which is specifically developed and designed to organize the rectangular microbiome data sets into a standard structure. microbiomedataset package also provide a lot of base processing functions to process and operate the microbiome_dataset class. In additional, the microbiome_dataset class can be processed by all the packages from tidymicrobiome.

Install microbiomedataset

You can install microbiomedataset from GitLab.

if(!require(remotes)){
install.packages("remotes")
}
remotes::install_gitlab("tidymicrobiome/microbiomedataset")

or GitHub

remotes::install_github("tidymicrobiome/microbiomedataset")

or tidymicrobiome.org

source("https://www.tidymicrobiome.org/tidymicrobiome-packages/install_tidymicrobiome.txt")
install_tidymicrobiome(from = "tidymicrobiome.org", which_package = "microbiomedataset")